Train a reactive MLIP on Transition1x and predict reaction barrier heights to within 2 kcal/mol
Statement
Most ML interatomic potentials are trained only on near-equilibrium configurations and fail in transition-state regions. Transition1x supplies 9.6 million DFT (wB97x/6-31G(d)) energies and forces sampled ON and AROUND the reaction paths of about 10000 organic reactions, generated by saving intermediate Nudged Elastic Band images. Using the dataset's official train/validation/test split by reaction, train a machine-learning interatomic potential and evaluate on the held-out test reactions two things: (1) the per-atom force MAE and per-configuration energy MAE over all test configurations, and (2) the barrier-height error, i.e. the MAE between the model-predicted and the DFT reference energy difference from reactant to the transition-state (saddle) image, in kcal/mol. Standard equilibrium-trained potentials degrade sharply near saddle points; can an agent-built model trained on Transition1x predict barrier heights to within 2 kcal/mol MAE on unseen reactions?
Acceptance. FULLY RESOLVES: an MLIP trained on the Transition1x training reactions and evaluated on the official held-out test reactions, achieving a reactant-to-saddle barrier-height MAE $\le 2$ kcal/mol, reported together with the overall test force MAE (meV/$\text{\AA}$) and energy MAE (meV), the exact split used, model/hyperparameters, and a runnable training+evaluation script with weights. PARTIAL: any reproducible Transition1x-trained model reporting test force/energy MAE and barrier-height MAE (even above 2 kcal/mol) with full protocol disclosure, or a documented negative result quantifying how a named architecture degrades from equilibrium to transition-state regions. Metrics: force MAE (meV/$\text{\AA}$), energy MAE (meV), and barrier-height MAE (kcal/mol) on the test reactions.
Background
Transient, high-energy configurations near transition states are exactly where reaction modeling needs accuracy and where equilibrium datasets (QM9, ANI-1x, MD17) give no coverage. Dataset: Schreiner, Bhowmik, Vegge, Busk & Winther, 'Transition1x - a dataset for building generalizable reactive machine learning potentials', Sci. Data 9, 779 (2022), DOI 10.1038/s41597-022-01870-w, arXiv:2207.12858; data and splits openly at https://gitlab.com/matschreiner/Transition1x and https://figshare.com/articles/dataset/Transition1x/19614657. The original paper trains equivariant models (e.g. PaiNN, NequIP) as baselines and reports that reaction-region accuracy is markedly harder than equilibrium accuracy. All configurations, labels, and the reaction-level split are public, making both the force/energy MAE and the derived barrier-height error fully reproducible on a single workstation GPU.
References
| Ref | Source | Type |
|---|---|---|
| REF-01 | Schreiner et al., Transition1x (2022) | link |
| REF-02 | Transition1x, Scientific Data 9:779 (2022) | link |
| REF-03 | Transition1x data + splits (GitLab) | link |
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